Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952112.1_cds_XP_016491928.1_82194
CDS Infomation

[gene=LOC107811498] [db_xref=GeneID:107811498] [protein=protein phosphatase 2C 29] [protein_id=XP_016491928.1] [location=join(42596..42738,44192..46100,47747..47860,48182..48446,50474..50598)] [gbkey=CDS]
Sequence

ATGGTGATTATAATTGAACCCAAAGCATTGTCAAAGTTAGCCATCGAAACCATCAGATTT
GCCCTCGAGTTTACCAAAGGCATAACCGGTCCTGTTTCTAACGGTCTCGAAGAAAGCTTT
GCCAACTCATCCGGCAGGGGTCCGTTTCTCTTTGTTTCTGGAGTTGGAACTAAGATATAT
ATANGAGGGTTTTCACAACTGTTTCCGTGTTTTAGCCCGGCGGTGAACCGGGGTGAACCG
GAGGTGATCTTCACCGGGAGTGAACCGCTTGATGAAACCCTCGGCCATTCCTTCTGTTAT
GTGAGGTCATCCGCTCGGTTTATCTCTCCCACTCACTCAGATCGATTTGTTTCGCCTTCT
CACTCGTTACGCTTTGATGAACCGGCTCCTCCTCCTCTTCCGAGGCCTAGACCACCCGGT
GCAACTGAAACCGGTTTTCGTGCCATTTCTGGGGCTTCCGTCAGTGCCAACACTTCTACT
CCTAGAACTGTCCTTCAACTTGACAATTTTTACGACGATGCCCCTGGCACTGATAGTCTT
GTGGGTTTTAATATTGTTAGGGGCAGTGTTGTAAATGGTTTCGAGAGTACGTCGTCGTTT
AGTGCTTTGCCGCTTCAACCGGTGCCTCGAGGCGGAGTCGGCCCCGAGCCGTCCGGTCCA
ATGGAGAGGGCTTTTTTCATGTCCGGTCCGATCGAGCGTGGAGCACTGTCCGGTCCACTT
GACGCTACCGCCGGCTCAGACGGCGGCGGAGGTAACCAAATACCCTTCTCTGCTCCACTG
GGTGGCGTTTATGTAAAAAAGAAGAGGAAGAAGGGCATTTCGGGAATTAGAAAAGCCTTC
TACAGGAATTTCTCGGAGAAGAAACGGCCGTGGGTTGTGCCGGTGAGGAATTTCAGAAAG
GACATTCCGGCCGCGGCAGCAGCAGAGTGTACACGTGATTCGGATATGGGTAGCAGTGAA
TCCAATGTCCAATGGGCTCTAGGTAAAGCGGGGGAGGATCGTGTGCATGTGGTTGTATCG
GAAGAGCATGGCTGGCTATTTGTTGGGATATATGATGGGTTTAATGGCCCTGATGCCCCT
GAGTTCTTGATGAGTAATCTTTACAAAGCTATGTACAAAGAATTAGAGGGTTTGTTTTGG
GACAGTGATGATACCAGTAACAACCCACAAGGGGCAGGAACTCTAAGTTCTGAAAATGAA
GTGATTGCTGAGAATTCGAGCATACCCAATTCGAATCCAGCACCTGAGGCAACTATTATA
GAGGTTGGTGGAGTAGAAGACGGTGAGAATGAGGTGGATAGAGGGCAGTCAAAGAAGGTG
ATGTTTCAATCAGGGGAGATAGAAGTTAGGAGGAGGAGATTGTGGGAATTTTTAGCAGAA
GAGGAAACAGAAGATGGGCTTGATCTTTCAGGTTCAGATAGATTTGCATTTTCAGTAGAT
GATGCATTAAGTGTAAATAATGCAGGTTCAGCAGTTAATAGGAGGTCGTTGCTGTTGTCC
AAGTTGAAACATGGATTGTTAAGTAAGCATAAAGAGAGTAAGAAATTGTTCCCATGGAAA
TTTGGATTGGAAGCTAAGGAGAAAGTCGAAGTGGAGGAGGAGAATAAAGTTGAGGAGGAA
ACGACTAGTAGAAGCGAGAGGAGGAGAAAGGCAGGTCCGGTTGATCATGATTTGGTTTTG
AGGGCAATGTCCAGGGCTCTTGAAGTTACTGAGCTGGCGTATTTGGATATGACAGATAAA
GTTCTTGATCGATATCCGGAGCTTGCACTAATGGGTTCTTGTTTGTTGGTTGCTTTAATG
AGAGATGAAGATGTGTATGTAATGAATGTAGGAGATAGTCGTGCTATTGTGGCACAATAT
GAGCTTGACGAGGTTAGTTCTGCTTCAGAACCCAAAGGTCGGTGTAATGGCGGGTCGACT
ATTGAGGGAATTGTTGAAGAATCCACAAGTGCCTGCAATGAGGAGACTAAGGTGACAAAC
GAGGCACCTGTTCAGGCTATGAAGCTGACTGCATTGCAATTATCCACTGATCATAGTACT
AGTATTGAAGAAGAAATTATTAGAATTAAGAGTGAGCACCCAGATGACAGCAATTGCATT
GTTAATGATAGAGTAAAAGGTCGTCTGAAGGTCACTCGTGCTTTCGGTGCAGGCTTCCTC
AAACAGCCTAAATTCAACGATGCATTGCTAGAAATGTTTCGGAATGTGTACATTGGCCAT
GCTCCTTACATATCTTGTACACCTTCGTTGCGTCACCATAGACTCTGTCCAGGTGATCAG
TTTTTGGTTCTCTCCTCTGATGGCCTATACCAATACTTGAGCAATGAGGAAGTGGTCTCT
CTTGTTGAGAATTTCATGGAGAAATTTCCAGATGGGGATCCTGCTCAACACCTGATTGAG
GAGCTTTTGTTCCGTGCAGCCAAGAAAGCTGGAATGGATTTTCACGAATTGCTGGATATC
CCTCAAGGAGACCGCAGGAAGTACCATGACGATGTTACTGTTATGGTGATATCTCTTGAA
GGAAGAATTTGGAAGTCGTCAGGCAAATACCTCTGA

Peptide Sequence

PEP ID

XP_016491928.1
PEP Infomation

PREDICTED: protein phosphatase 2C 29 [Nicotiana tabacum]
Sequence

MVIIIEPKALSKLAIETIRFALEFTKGITGPVSNGLEESFANSSGRGPFLFVSGVGTKIY
IXGFSQLFPCFSPAVNRGEPEVIFTGSEPLDETLGHSFCYVRSSARFISPTHSDRFVSPS
HSLRFDEPAPPPLPRPRPPGATETGFRAISGASVSANTSTPRTVLQLDNFYDDAPGTDSL
VGFNIVRGSVVNGFESTSSFSALPLQPVPRGGVGPEPSGPMERAFFMSGPIERGALSGPL
DATAGSDGGGGNQIPFSAPLGGVYVKKKRKKGISGIRKAFYRNFSEKKRPWVVPVRNFRK
DIPAAAAAECTRDSDMGSSESNVQWALGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAP
EFLMSNLYKAMYKELEGLFWDSDDTSNNPQGAGTLSSENEVIAENSSIPNSNPAPEATII
EVGGVEDGENEVDRGQSKKVMFQSGEIEVRRRRLWEFLAEEETEDGLDLSGSDRFAFSVD
DALSVNNAGSAVNRRSLLLSKLKHGLLSKHKESKKLFPWKFGLEAKEKVEVEEENKVEEE
TTSRSERRRKAGPVDHDLVLRAMSRALEVTELAYLDMTDKVLDRYPELALMGSCLLVALM
RDEDVYVMNVGDSRAIVAQYELDEVSSASEPKGRCNGGSTIEGIVEESTSACNEETKVTN
EAPVQAMKLTALQLSTDHSTSIEEEIIRIKSEHPDDSNCIVNDRVKGRLKVTRAFGAGFL
KQPKFNDALLEMFRNVYIGHAPYISCTPSLRHHRLCPGDQFLVLSSDGLYQYLSNEEVVS
LVENFMEKFPDGDPAQHLIEELLFRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLE
GRIWKSSGKYL

Transcript Sequence

Gene sequence data has not been registered.